Structure of PDB 4v75 Chain B5

Receptor sequence
>4v75B5 (length=223) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGID
ARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLA
DQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAE
AVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKP
TQAKGVYIKKVSISTTMGAGVAV
3D structure
PDB4v75 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainB5
Resolution12.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B5 R53 R60 P133 R164 K167 R52 R59 P132 R163 K166
BS02 rna B5 T5 K6 R7 F38 A45 R164 D166 N168 I170 Q203 T217 T4 K5 R6 F37 A44 R163 D165 N167 I169 Q202 T216
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0045947 negative regulation of translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v75, PDBe:4v75, PDBj:4v75
PDBsum4v75
PubMed24186064
UniProtP0A7L0|RL1_ECOLI Large ribosomal subunit protein uL1 (Gene Name=rplA)

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