Structure of PDB 4v6r Chain B3
Receptor sequence
>4v6rB3 (length=56) Species:
562
(Escherichia coli) [
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AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRG
RKVIAK
3D structure
PDB
4v6r
Structural characterization of mRNA-tRNA translocation intermediates.
Chain
B3
Resolution
11.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
B3
A1 V2 Q3 Q4 N5 K6 T8 R9 S10 K11 R12 M14 R15 R16 S17 H18 D19 V29 D30 K31 H37 R39 H40 H41 Y48 R49 R51 K56
A1 V2 Q3 Q4 N5 K6 T8 R9 S10 K11 R12 M14 R15 R16 S17 H18 D19 V29 D30 K31 H37 R39 H40 H41 Y48 R49 R51 K56
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0005515
protein binding
Biological Process
GO:0000027
ribosomal large subunit assembly
GO:0000302
response to reactive oxygen species
GO:0002181
cytoplasmic translation
GO:0006412
translation
GO:0009314
response to radiation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0015934
large ribosomal subunit
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v6r
,
PDBe:4v6r
,
PDBj:4v6r
PDBsum
4v6r
PubMed
22467828
UniProt
P0A7N4
|RL32_ECOLI Large ribosomal subunit protein bL32 (Gene Name=rpmF)
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