Structure of PDB 6gzq Chain B2

Receptor sequence
>6gzqB2 (length=237) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELER
TFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLT
NFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFR
LLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPG
NDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ
3D structure
PDB6gzq Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
ChainB2
Resolution3.28 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B2 R23 P26 R96 G99 G100 N104 T107 R111 R114 K132 R175 E176 R20 P23 R93 G96 G97 N101 T104 R108 R111 K129 R172 E173
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6gzq, PDBe:6gzq, PDBj:6gzq
PDBsum6gzq
PubMed30301898
UniProtP80371|RS2_THET8 Small ribosomal subunit protein uS2 (Gene Name=rpsB)

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