Structure of PDB 4v5d Chain B2

Receptor sequence
>4v5dB2 (length=71) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIR
DLKRQIARLLTVLNEKRRQNA
3D structure
PDB4v5d Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome.
ChainB2
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B2 K2 L3 S4 R7 L10 R14 Q46 N47 H48 R51 R55 A58 R59 L61 T62 N65 R69 K1 L2 S3 R6 L9 R13 Q45 N46 H47 R50 R54 A57 R58 L60 T61 N64 R68
BS02 MG B2 Q9 R59 Q8 R58
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v5d, PDBe:4v5d, PDBj:4v5d
PDBsum4v5d
PubMed19363482
UniProtQ5SHP6|RL29_THET8 Large ribosomal subunit protein uL29 (Gene Name=rpmC)

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