Structure of PDB 7oyb Chain B1

Receptor sequence
>7oybB1 (length=394) Species: 7955 (Danio rerio) [Search protein sequence]
SHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKA
GMTHIVREVDRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRS
FKTIFAEHISDECKRRFYKNWYKSKKKAFTKYCKRWQDEEGKKQLEKDFS
SMKKYCQIIRIIAHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKL
EQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLPRKTHRGLRKV
ACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLVKN
NASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSL
LVQTSRRAQEKIDLKFIDTTSKFGHGRFQTIEEKKNFMGPLKKD
3D structure
PDB7oyb A molecular network of conserved factors keeps ribosomes dormant in the egg.
ChainB1
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B1 S2 H3 R4 K5 F6 S7 A8 P9 R10 H11 G12 S13 L14 G15 F16 L17 P18 R19 K20 R21 K23 H25 R26 K28 K30 S31 K50 M53 T54 R62 G64 S65 A75 Y92 T95 P96 R97 L99 R100 S101 F102 K103 T104 R116 R117 F118 Y119 K120 N121 Y123 K124 S125 K126 K128 A129 F130 K132 Y133 R136 Y156 R161 R174 Q175 K176 K177 L180 E182 T223 K224 G225 H226 G227 C228 K229 G230 R234 K238 K239 R242 K243 T244 H245 R246 G247 L248 R249 K250 V251 A252 C253 I254 G255 A256 W257 H258 P259 A260 R261 V262 S265 R268 A269 Q271 Y274 H276 R277 T278 E279 I280 N281 K282 L317 G318 V321 H322 G324 K334 G335 C336 V337 V338 T340 K342 R343 L351 L352 R357 S372 K373 F374 G375 H376 I382 K385 M389 L392 K393 K394 S1 H2 R3 K4 F5 S6 A7 P8 R9 H10 G11 S12 L13 G14 F15 L16 P17 R18 K19 R20 K22 H24 R25 K27 K29 S30 K49 M52 T53 R61 G63 S64 A74 Y91 T94 P95 R96 L98 R99 S100 F101 K102 T103 R115 R116 F117 Y118 K119 N120 Y122 K123 S124 K125 K127 A128 F129 K131 Y132 R135 Y155 R160 R173 Q174 K175 K176 L179 E181 T222 K223 G224 H225 G226 C227 K228 G229 R233 K237 K238 R241 K242 T243 H244 R245 G246 L247 R248 K249 V250 A251 C252 I253 G254 A255 W256 H257 P258 A259 R260 V261 S264 R267 A268 Q270 Y273 H275 R276 T277 E278 I279 N280 K281 L316 G317 V320 H321 G323 K333 G334 C335 V336 V337 T339 K341 R342 L350 L351 R356 S371 K372 F373 G374 H375 I381 K384 M388 L391 K392 K393
BS02 MG B1 M168 L171 H173 M167 L170 H172
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0031017 exocrine pancreas development
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oyb, PDBe:7oyb, PDBj:7oyb
PDBsum7oyb
PubMed36653451
UniProtA0A2R8Q924

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