Structure of PDB 4v4h Chain B1

Receptor sequence
>4v4hB1 (length=54) Species: 562 (Escherichia coli) [Search protein sequence]
AKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKE
AKIK
3D structure
PDB4v4h Structural analysis of kasugamycin inhibition of translation.
ChainB1
Resolution3.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B1 A1 K2 E6 K7 Y20 K24 N25 K26 K29 P30 E31 L33 E34 K36 K37 F38 D39 V42 Q44 H45 A1 K2 E6 K7 Y20 K24 N25 K26 K29 P30 E31 L33 E34 K36 K37 F38 D39 V42 Q44 H45
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v4h, PDBe:4v4h, PDBj:4v4h
PDBsum4v4h
PubMed16998486
UniProtP0A7N9|RL33_ECOLI Large ribosomal subunit protein bL33 (Gene Name=rpmG)

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