Structure of PDB 4v53 Chain B0

Receptor sequence
>4v53B0 (length=56) Species: 562 (Escherichia coli) [Search protein sequence]
AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRG
RKVIAK
3D structure
PDB4v53 Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
ChainB0
Resolution3.54 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B0 A1 V2 Q3 Q4 N5 K6 T8 R9 S10 K11 R12 M14 R15 R16 S17 H18 T25 S26 S28 V29 K31 H37 R39 H40 Y48 R49 A1 V2 Q3 Q4 N5 K6 T8 R9 S10 K11 R12 M14 R15 R16 S17 H18 T25 S26 S28 V29 K31 H37 R39 H40 Y48 R49
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0000302 response to reactive oxygen species
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0009314 response to radiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v53, PDBe:4v53, PDBj:4v53
PDBsum4v53
PubMed17660832
UniProtP0A7N4|RL32_ECOLI Large ribosomal subunit protein bL32 (Gene Name=rpmF)

[Back to BioLiP]