Structure of PDB 9eo6 Chain B

Receptor sequence
>9eo6B (length=306) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence]
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDML
NPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK
YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGF
NIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI
TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDIL
GPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC
SGVTFQ
3D structure
PDB9eo6 Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
ChainB
Resolution2.11 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B H41 F140 L141 N142 G143 S144 C145 H163 M165 E166 D187 R188 Q189 T190 H41 F140 L141 N142 G143 S144 C145 H163 M165 E166 D187 R188 Q189 T190
BS02 peptide B A255 Q256 G258 A255 Q256 G258
External links
PDB RCSB:9eo6, PDBe:9eo6, PDBj:9eo6
PDBsum9eo6
PubMed39194208
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep)

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