Structure of PDB 9cpo Chain B

Receptor sequence
>9cpoB (length=195) Species: 11120 (Infectious bronchitis virus) [Search protein sequence]
FSHIPSYAEYERAKSIYEKVLADSKNGGVTQQELAAYRKAANIAKSVFDR
DLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSE
KLNVLFDQANSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGVHVTYST
VVWNIDCVTDADGTELHPTSTGSGLTYCISGDNIAWPLKVNLTRN
3D structure
PDB9cpo A genus-specific nsp12 region impacts polymerase assembly in Alpha- and Gammacoronaviruses
ChainB
Resolution3.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B Q37 R55 A58 Q32 R50 A53
BS02 rna B K44 N47 K39 N42
External links
PDB RCSB:9cpo, PDBe:9cpo, PDBj:9cpo
PDBsum9cpo
PubMed39091740
UniProtP0C6Y3|R1AB_IBVM Replicase polyprotein 1ab (Gene Name=rep)

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