Structure of PDB 9ckv Chain B

Receptor sequence
>9ckvB (length=361) Species: 9606 (Homo sapiens) [Search protein sequence]
PRGSKDIKKNKNVIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMD
LSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTP
AKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEG
GFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKN
LIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSY
CKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRPLGF
TEEVEVILQYI
3D structure
PDB9ckv De Novo Design of Integrin alpha5beta1 Modulating Proteins for Regenerative Medicine
ChainB
Resolution3.19 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN B S132 S134 E229 S52 S54 E149
BS02 MN B S134 D137 D138 D259 S54 D57 D58 D179
BS03 MN B E169 N224 D226 P228 E229 E89 N144 D146 P148 E149
External links
PDB RCSB:9ckv, PDBe:9ckv, PDBj:9ckv
PDBsum9ckv
PubMed
UniProtP05556|ITB1_HUMAN Integrin beta-1 (Gene Name=ITGB1)

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