Structure of PDB 9c4i Chain B

Receptor sequence
>9c4iB (length=241) Species: 500177 (Centrolobium microchaete) [Search protein sequence]
SDSLSFSFINFDKDERNVIAQGDARIVGNNILQLTRTDSNGSPVKSTVGR
ILYVAQVRLWEKSTNRVANFQSQFSFFLESPLSNPADGIAFFIAPPDTAI
PSGSAGGLLGLFSPKTAQNESANQVLAVEFDTFYAQNSNTWDPNYPHIGI
DVNSIKSAKTVRWERREGVTLNVLVTYNPSTRTLDVVATYPDGQRYDISV
VVDVTTVLPEWVRVGFSAASGEQFQTHNLESWSFTSTLLYT
3D structure
PDB9c4i Centrolobium microchaete seed lectin (CML) complexed with Man1-3Man-OMe
ChainB
Resolution1.3 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MMA B F133 S138 Q223 F133 S138 Q223
BS02 MAN B A86 D87 G107 F133 N139 G221 E222 Q223 A86 D87 G107 F133 N139 G221 E222 Q223
BS03 CA B D131 F133 N139 D142 D131 F133 N139 D142
BS04 MN B E129 D131 D142 H147 E129 D131 D142 H147
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:9c4i, PDBe:9c4i, PDBj:9c4i
PDBsum9c4i
PubMed
UniProtC0HK20|LECC1_CENMI Mannose-specific lectin CML-2

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