Structure of PDB 9axy Chain B
Receptor sequence
>9axyB (length=312) Species:
9606
(Homo sapiens) [
Search protein sequence
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LELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKP
SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI
SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR
DVKPSNILVNSRGEIKLCDFGVSGQLIDAMANAFVGTRSYMSPERLQGTH
YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMPMAIFELLDYIVNEP
PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDF
AGWLCSTIGLNQ
3D structure
PDB
9axy
The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Chain
B
Resolution
3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
2.7.12.2
: mitogen-activated protein kinase kinase.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
A1AHE
B
L118 V127 F129 I141 R189 D190 C207 D208 F209 G210 V211 S212 L215 I216
L79 V88 F90 I102 R150 D151 C168 D169 F170 G171 V172 S173 L176 I177
BS02
ANP
B
G75 A76 G77 V82 A95 K97 M146 S150 Q153 K192 S194 L197
G36 A37 G38 V43 A56 K58 M107 S111 Q114 K153 S155 L158
BS03
MG
B
N195 D208
N156 D169
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0004674
protein serine/threonine kinase activity
GO:0004708
MAP kinase kinase activity
GO:0004712
protein serine/threonine/tyrosine kinase activity
GO:0004713
protein tyrosine kinase activity
GO:0005078
MAP-kinase scaffold activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0030295
protein kinase activator activity
GO:0043539
protein serine/threonine kinase activator activity
GO:0097110
scaffold protein binding
GO:0106310
protein serine kinase activity
Biological Process
GO:0000165
MAPK cascade
GO:0006468
protein phosphorylation
GO:0006935
chemotaxis
GO:0007165
signal transduction
GO:0007507
heart development
GO:0008285
negative regulation of cell population proliferation
GO:0010628
positive regulation of gene expression
GO:0014044
Schwann cell development
GO:0016310
phosphorylation
GO:0021697
cerebellar cortex formation
GO:0030182
neuron differentiation
GO:0030216
keratinocyte differentiation
GO:0030878
thyroid gland development
GO:0032872
regulation of stress-activated MAPK cascade
GO:0035987
endodermal cell differentiation
GO:0038133
ERBB2-ERBB3 signaling pathway
GO:0042552
myelination
GO:0043410
positive regulation of MAPK cascade
GO:0044342
type B pancreatic cell proliferation
GO:0045893
positive regulation of DNA-templated transcription
GO:0048009
insulin-like growth factor receptor signaling pathway
GO:0048538
thymus development
GO:0048679
regulation of axon regeneration
GO:0048870
cell motility
GO:0050772
positive regulation of axonogenesis
GO:0060020
Bergmann glial cell differentiation
GO:0060324
face development
GO:0060425
lung morphogenesis
GO:0060440
trachea formation
GO:0060502
epithelial cell proliferation involved in lung morphogenesis
GO:0060674
placenta blood vessel development
GO:0060711
labyrinthine layer development
GO:0070371
ERK1 and ERK2 cascade
GO:0070374
positive regulation of ERK1 and ERK2 cascade
GO:0071902
positive regulation of protein serine/threonine kinase activity
GO:0090170
regulation of Golgi inheritance
GO:0090398
cellular senescence
GO:1903226
positive regulation of endodermal cell differentiation
GO:2000641
regulation of early endosome to late endosome transport
Cellular Component
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005739
mitochondrion
GO:0005769
early endosome
GO:0005770
late endosome
GO:0005783
endoplasmic reticulum
GO:0005794
Golgi apparatus
GO:0005813
centrosome
GO:0005816
spindle pole body
GO:0005829
cytosol
GO:0005856
cytoskeleton
GO:0005886
plasma membrane
GO:0005925
focal adhesion
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:9axy
,
PDBe:9axy
,
PDBj:9axy
PDBsum
9axy
PubMed
38588399
UniProt
Q02750
|MP2K1_HUMAN Dual specificity mitogen-activated protein kinase kinase 1 (Gene Name=MAP2K1)
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