Structure of PDB 9ate Chain B

Receptor sequence
>9ateB (length=306) Species: 1335626 (Middle East respiratory syndrome-related coronavirus) [Search protein sequence]
HHSGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDNTVWCPRHVMCPADQ
LSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVAN
PSTPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSC
GSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQL
TDKYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGT
QSVDMLAVKTGVAIEQLLYAIQQLYTGFQGKQILGSTMLEDEFTPEDVNM
QIMGVV
3D structure
PDB9ate Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
ChainB
Resolution1.85 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 A1AGN B F143 C145 G146 C148 H166 Q167 M168 E169 Q192 F145 C147 G148 C150 H168 Q169 M170 E171 Q194
BS02 A1AGM B H41 F143 C145 C148 H166 E169 K191 Q192 V193 H43 F145 C147 C150 H168 E171 K193 Q194 V195
External links
PDB RCSB:9ate, PDBe:9ate, PDBj:9ate
PDBsum9ate
PubMed38953866
UniProtK9N638|R1A_MERS1 Replicase polyprotein 1a (Gene Name=1a)

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