Structure of PDB 9at5 Chain B

Receptor sequence
>9at5B (length=303) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence]
GSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDM
LNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTP
KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVG
FNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTT
ITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDI
LGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQ
CSG
3D structure
PDB9at5 Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
ChainB
Resolution1.45 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 A1AGO B H41 F140 N142 C145 H163 H164 M165 E166 P168 Q189 H42 F141 N143 C146 H164 H165 M166 E167 P169 Q190
BS02 A1AGP B H41 F140 N142 C145 H163 H164 M165 E166 P168 Q189 H42 F141 N143 C146 H164 H165 M166 E167 P169 Q190
External links
PDB RCSB:9at5, PDBe:9at5, PDBj:9at5
PDBsum9at5
PubMed38953866
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep)

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