Structure of PDB 8zkk Chain B

Receptor sequence

>8zkkB (length=202) Species: 666 (Vibrio cholerae) [Search protein sequence]

MDKATLVKTIAYRMGNVKGQDTAIDFELALSIERLEGQEFVPWFLLSENN
FFEGTAQENRIPVPRGFIREYEEGSLYLRRVAGTGKCLIKKSQDQLLKYE
GMTGEPSHYSLTNQYFRIYPVPQEDFKVELLFYRKSSTLNVEDNPWYEYA
AELLVAETIWAMLSARRDKMADYWKSVAADQMRRLTILDAERRLANQEIF
MG

3D structure

PDB

8zkk Three-dimensional structures of Vibrio cholerae typing podophage VP1 in two states

Chain

Resolution

3.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	E48 N49 N50 F51 F52 P62 T138 N140	E48 N49 N50 F51 F52 P62 T138 N140

External links

PDB	RCSB:8zkk, PDBe:8zkk, PDBj:8zkk
PDBsum	8zkk
PubMed

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