Structure of PDB 8zaq Chain B

Receptor sequence

>8zaqB (length=259) Species: 42384 (Hyphochytrium catenoides) [Search protein sequence]

PFYDSRPPEGWPKGSINDMDYPLLGSICAVCCVFVAGSGIWMLYRLDLGM
GYSCKPYKSGRAPEVNSLSGIICLLCGTMYAAKSFDFFDGGGTPFSLNWY
WYLDYVFTTPLLILDFAFTLDLPHKIRYFFAVFLTLWCGVAAFVTPSAYR
FAYYALGCCWFTPFALSLMRHVKERYLVYPPKCQRWLFWACVIFFGFWPM
FPILFIFSWLGTGHISQQAFYIIHAFLDLTCKSIFGILMTVFRLELEEHT
EVQGLPLNE

3D structure

PDB

8zaq Channelrhodopsins with distinct chromophores and binding patterns.

Chain

Resolution

2.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	RET	B	Y103 Y106 T110 T136 G140 Y155 G158 F162 W199 F202 D229 K233	Y102 Y105 T109 T135 G139 Y154 G157 F161 W198 F201 D228 K232

External links

PDB	RCSB:8zaq, PDBe:8zaq, PDBj:8zaq
PDBsum	8zaq
PubMed	39181878

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