Structure of PDB 8yl9 Chain B

Receptor sequence
>8yl9B (length=337) Species: 104259 (Penicillium brasilianum) [Search protein sequence]
DFLSGAFHYSDSVNPSKYSPRPSDYFGTLPFRTSRFEREAADVTADYLRK
WQKAVKADNPERKDLVFHGSTTTLGHFVSWAYPECIPDRVDLCTQICDFG
FYWDDVTDSVNVQENAEITQDLALALLSELTLGQRLEPKLEINKIVVQML
WGVLDKDRKSGLEMIKFWKGHLDGQAESAHNNMSFEEYTKHRLSEVGARW
AVEVGCWSLGINLSREKKDSVAHFVNKGLLAAALMNDYYSFNKEFDEHQR
AGSMDRLQNGLGILMREYGYTETEARSILREEIRKGERAIMDGYIAWRES
ADSSSESHELNRYIVMIILMIGGITFWSSHASRYHRD
3D structure
PDB8yl9 Structural Insights into the Terpene Cyclization Domains of Two Fungal Sesterterpene Synthases and Enzymatic Engineering for Sesterterpene Diversification.
ChainB
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.29: geranylgeranyl diphosphate synthase.
2.5.1.81: geranylfarnesyl diphosphate synthase.
4.2.3.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B N237 S241 E245 N236 S240 E244
BS02 MG B D105 D109 D104 D108
BS03 MG B D105 D109 D104 D108
BS04 PPV B D105 R193 N237 S241 K244 E245 R334 Y335 D104 R192 N236 S240 K243 E244 R333 Y334
BS05 BTM B F78 G101 H172 W201 A202 F77 G100 H171 W200 A201
External links
PDB RCSB:8yl9, PDBe:8yl9, PDBj:8yl9
PDBsum8yl9
PubMed38584136
UniProtA0A2Z6AQX7|PBSS_PENBI Sesterbrasiliatriene synthase PbSS (Gene Name=PbSS)

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