Structure of PDB 8yhd Chain B

Receptor sequence

>8yhdB (length=199) Species: 256318 (metagenome) [Search protein sequence]

AKTMKKIYVTMKTLSPLYTGEVRREDKEAAQKRVNFPVRKTATNKVLIPF
KGALRSALEIMLKAKGENVCDTGESRARPCGRCVTCSLFGSMGRAGRASV
DFLISNDTKEQIVRESTHLRIERQTKSASDTFKGEEVIEGATFTATITIS
NPQEKDLSLIQSALKFIEENGIGGWLNKGYGRVSFEVKSEDVATDRFLK

3D structure

PDB

8yhd Structural basis for the activity of the type VII CRISPR-Cas system.

Chain

Resolution

2.93 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	B	G21 E22 F37 R40 P50 K52 G53 A54 S57 G91 S92 M93 A96 T118 H119 L120 R121 I122 R124 K127 A129 F133 W176 N178	G20 E21 F36 R39 P49 K51 G52 A53 S56 G90 S91 M92 A95 T117 H118 L119 R120 I121 R123 K126 A128 F132 W175 N177

External links

PDB	RCSB:8yhd, PDBe:8yhd, PDBj:8yhd
PDBsum	8yhd
PubMed	39143216

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