Structure of PDB 8xay Chain B

Receptor sequence

>8xayB (length=567) Species: 562 (Escherichia coli) [Search protein sequence]

NDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLA
IIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAK
LDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTG
SGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLN
VDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDP
ATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDN
ENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSK
SVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGY
HSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEG
RKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTV
GDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRK
EWVDSEFDKIIEQWSKS

3D structure

PDB

8xay Cryo-EM structure of an anti-phage complex

Chain

Resolution

2.81 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	B	N230 N233 Q234 K328	N226 N229 Q230 K324
BS02	dna	B	A229 R284 S320 S321 A322	A225 R280 S316 S317 A318
BS03	AGS	B	T153 G154 G156 K157 S158 H159 Q466 E516 G517 K533 S543	T149 G150 G152 K153 S154 H155 Q462 E512 G513 K529 S539

External links

PDB	RCSB:8xay, PDBe:8xay, PDBj:8xay
PDBsum	8xay
PubMed	38834762

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