Structure of PDB 8x46 Chain B

Receptor sequence
>8x46B (length=269) Species: 70601 (Pyrococcus horikoshii OT3) [Search protein sequence]
KMRDRLFFLLSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEV
GPGLGFLTDELAKRAKKVYTIEIDQKIIEILKKEYSWNNVKIIQGDAVRV
EWPKFNKVVSNIPYKISSPFTFKLLKTDFERAVVMYQLEFALRMVAKPGS
RNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKVDSALVLIEPRKDKIVLN
ENLVKALFQHRRKTVPRALKDSIHMLGVSKDEIRGIINNVPHSNKRVFQL
YPEEVKDIEEYLKKHGIIS
3D structure
PDB8x46 Structural and functional characterization of archaeal DIMT1 unveils distinct protein dynamics essential for efficient catalysis.
ChainB
Resolution2.2 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SFG B I42 G43 H45 G72 G74 I92 E93 I94 D117 A118 N132 P134 Y135 I21 G22 H24 G51 G53 I71 E72 I73 D96 A97 N111 P113 Y114
BS02 SO3 B H45 P202 H24 P181
BS03 ARG B E188 L210 E212 E167 L189 E191
External links
PDB RCSB:8x46, PDBe:8x46, PDBj:8x46
PDBsum8x46
PubMed39146930
UniProtO59487|RSMA_PYRHO Probable ribosomal RNA small subunit methyltransferase A (Gene Name=rsmA)

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