Structure of PDB 8x35 Chain B

Receptor sequence
>8x35B (length=238) Species: 4081 (Solanum lycopersicum) [Search protein sequence]
SCSLNLQKLCYELMPKHIALIMDGNRRWAKDKGLEVYEGHKHIIPKLKEI
CDISSKLGIQIITAFAFSTENWKRSKEEVDFLLQMFEEIYDEFSRSGVRV
SIIGCKSDLPMTLQKCIALTEETTKGNKGLHLVIALNYGGYYDILQATKS
IVNKAMNGLLDVEDINKNLFDQELESKCPNPDLLIRTGGEQRVSNFLLWQ
LAYTEFYFTNTLFPDFGEEDLKEAIMNFQQRHRRFGGH
3D structure
PDB8x35 Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
ChainB
Resolution1.92 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.28: dimethylallylcistransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 IPE B R297 G299 R234 G236
BS02 DPO B R249 E253 S257 R186 E190 S194
BS03 DPO B D86 G87 N88 R89 R90 R137 D23 G24 N25 R26 R27 R74
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004659 prenyltransferase activity
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0045547 dehydrodolichyl diphosphate synthase activity
GO:0046872 metal ion binding
GO:0047863 dimethylallylcistransferase activity
Biological Process
GO:0009409 response to cold
GO:0009668 plastid membrane organization
GO:0016094 polyprenol biosynthetic process
Cellular Component
GO:0009507 chloroplast
GO:0009570 chloroplast stroma

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8x35, PDBe:8x35, PDBj:8x35
PDBsum8x35
PubMed38225831
UniProtC1K5M2|CPT1_SOLLC Dimethylallylcistransferase CPT1, chloroplastic (Gene Name=CPT1)

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