Structure of PDB 8wt9 Chain B

Receptor sequence

>8wt9B (length=311) Species: 562 (Escherichia coli) [Search protein sequence]

ELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKID
HAHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDT
VDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTE
TAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPG
IGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYASRMSKAGHVSLRR
ALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLK
SGVPFDASRHN

3D structure

PDB

8wt9 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	B	A61 T62 G63 N84 Q147 N150 R151 T154 R221 F222 H224 R226 Q227 F231 T235 P236 S249 M251 K253 A254 G255 H256 V257 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 R300 K301 G308 V309 S312 F316 D317 R320 H321	A58 T59 G60 N81 Q144 N147 R148 T151 R218 F219 H221 R223 Q224 F228 T232 P233 S238 M240 K242 A243 G244 H245 V246 R249 R250 Y253 R272 K278 K279 K281 V282 G285 A286 R289 K290 G297 V298 S301 F305 D306 R309 H310
BS02	rna	B	R27 R98 N99 V104 R107	R24 R95 N96 V101 R104
BS03	dna	B	D11 K14 E60 T62 Y65 N84 P85 K89 K100 R250 K253 A254 Y264 M268 S272 G291 L295	D8 K11 E57 T59 Y62 N81 P82 K86 K97 R239 K242 A243 Y253 M257 S261 G280 L284
BS04	dna	B	P202 G203 I204 G205 K207 T208 M265 V269 K273	P199 G200 I201 G202 K204 T205 M254 V258 K262
BS05	MG	B	D11 E60	D8 E57

External links

PDB	RCSB:8wt9, PDBe:8wt9, PDBj:8wt9
PDBsum	8wt9
PubMed	38926616
UniProt	A0A2X3M8B0

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