Structure of PDB 8wt8 Chain B

Receptor sequence

>8wt8B (length=318) Species: 562 (Escherichia coli) [Search protein sequence]

ELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKID
HAHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDT
VDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTE
TAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPG
IGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSK
AGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLA
QVAYGVLKSGVPFDASRH

3D structure

PDB

8wt8 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.9 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	B	A61 T62 G63 N84 Q147 N150 R151 T154 R221 F222 H224 R226 Q227 F231 T235 P236 R238 S249 R250 M251 K253 A254 G255 H256 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 R300 K301 G308 V309 S312 F316 D317 R320 H321	A58 T59 G60 N81 Q144 N147 R148 T151 R218 F219 H221 R223 Q224 F228 T232 P233 R235 S246 R247 M248 K250 A251 G252 H253 R257 R258 Y261 R280 K286 K287 K289 V290 G293 A294 R297 K298 G305 V306 S309 F313 D314 R317 H318
BS02	rna	B	L97 R98 K100 R107	L94 R95 K97 R104
BS03	dna	B	K14 T62 N84 P85 K89 K253 Y264 M268 S272 G291 L295	K11 T59 N81 P82 K86 K250 Y261 M265 S269 G288 L292
BS04	dna	B	E153 P202 G203 I204 G205 K207 T208 M265 V269 K273	E150 P199 G200 I201 G202 K204 T205 M262 V266 K270

External links

PDB	RCSB:8wt8, PDBe:8wt8, PDBj:8wt8
PDBsum	8wt8
PubMed	38926616
UniProt	A0A2X3M8B0

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