Structure of PDB 8wt6 Chain B

Receptor sequence

>8wt6B (length=318) Species: 562 (Escherichia coli) [Search protein sequence]

ELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKID
HAHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDT
VDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTE
TAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPG
IGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSK
AGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLA
QVAYGVLKSGVPFDASRH

3D structure

PDB

8wt6 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	B	A61 T62 N84 Q147 N150 R151 R221 F222 H224 R226 Q227 F231 T235 P236 R238 S249 M251 K253 A254 G255 H256 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 M299 R300 K301 G308 V309 S312 V314 F316 D317 R320 H321	A58 T59 N81 Q144 N147 R148 R218 F219 H221 R223 Q224 F228 T232 P233 R235 S246 M248 K250 A251 G252 H253 R257 R258 Y261 R280 K286 K287 K289 V290 G293 A294 M296 R297 K298 G305 V306 S309 V311 F313 D314 R317 H318
BS02	rna	B	L97 R98 R107	L94 R95 R104
BS03	dna	B	P202 G203 G205 K207 T208 M265 V269 K273	P199 G200 G202 K204 T205 M262 V266 K270
BS04	dna	B	K14 T62 N84 P85 K89 R250 K253 Y264 M268 S272 G291 K292	K11 T59 N81 P82 K86 R247 K250 Y261 M265 S269 G288 K289
BS05	dna	B	S241 G242 S243 S244	S238 G239 S240 S241
BS06	dna	B	R246 A248	R243 A245

External links

PDB	RCSB:8wt6, PDBe:8wt6, PDBj:8wt6
PDBsum	8wt6
PubMed	38926616
UniProt	A0A2X3M8B0

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