Structure of PDB 8wmv Chain B

Receptor sequence
>8wmvB (length=732) Species: 52970 (Rhodomonas salina) [Search protein sequence]
TKFPKFSQALAQDPATRRIWYGLATAHDLESHDGMTEENLYQKIFASHFG
HLAVIFLWTSGNLFHVAWQGNFEQWVLNPLKVKPIAHAIWDPHFGQPAVK
AFTKGGVSYPVNIATSGVYHWWYTIGMRSNTDLYAGSLFLLFLAGVFLFA
GWLHLQPKFRPGLSWFKNNESRLNHHLSGLFGFSSLAWSAHLIHVAIPEA
RGQHVCWDNFTKVAPHPAGLQPFFTGNWGAYAASPDTTNHIFGTSEGAGT
AILTFLGGFHPQTQALWLTDIAHHHLAIGVVFIFAGHMYRTNWGIGHSLK
EILDAHRPPGGRLGAGHKGIFETLTNSLHFQLGLALASLGVITSLVAQHM
YALPSYAFIAKDYVTQSALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEQ
NKNNVLARILDHKEAIISHLSWVSLFLGFHTLGIYVHNDVVVAFGTPEKQ
ILVEPVFAQWIQASSGKALYGFDVLLSSTNSVAANASSNIWLPGWLEAIN
SGKNSLFLPIGPGDFLIHHAIALALHTTTLILVKGALDARGSKLMPDKKD
FGYAFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHITIW
QGNAGQFNESSTYIMGWLRDYLWLNSSPLINGYNPFGMNSLSVWSWMFLF
GHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSI
VQARLVGLIHFTAGYIFTYAAFVIASTTGKFG
3D structure
PDB8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
ChainB
Resolution2.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.97.1.12: photosystem I.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA B S425 L426 G429 T528 L577 F580 W581 S424 L425 G428 T527 L576 F579 W580
BS02 CLA B D440 W581 N584 W588 D439 W580 N583 W587
BS03 CLA B T684 P685 T683 P684
BS04 CLA B W647 L650 H653 L654 W656 A657 W646 L649 H652 L653 W655 A656
BS05 CLA B S419 S422 W423 L426 S418 S421 W422 L425
BS06 SF4 B C558 C567 W666 C557 C566 W665
BS07 CLA B L677 H681 T684 V690 L676 H680 T683 V689
BS08 CLA B W588 W618 S627 F649 H653 W656 Y716 T719 Y720 F723 W587 W617 S626 F648 H652 W655 Y715 T718 Y719 F722
BS09 CLA B A657 T658 M661 Y669 W670 A656 T657 M660 Y668 W669
BS10 CLA B H28 I45 S48 H49 H52 L329 L333 A336 H27 I44 S47 H48 H51 L328 L332 A335
BS11 CLA B H28 H52 W59 H27 H51 W58
BS12 CLA B G62 F65 H66 W69 H88 G61 F64 H65 W68 H87
BS13 CLA B N63 A87 H88 N113 A115 S117 V644 W645 N62 A86 H87 N112 A114 S116 V643 W644
BS14 CLA B I90 W91 D92 H94 F95 V644 I89 W90 D91 H93 F94 V643
BS15 CLA B F46 F50 A151 L154 H155 F160 W166 F45 F49 A150 L153 H154 F159 W165
BS16 CLA B W166 S172 H176 W165 S171 H175
BS17 CLA B F46 H49 F50 L53 W166 R173 H176 H177 L181 F45 H48 F49 L52 W165 R172 H175 H176 L180
BS18 CLA B G127 M128 F140 L144 A188 W189 H192 H195 V196 C207 W208 G126 M127 F139 L143 A187 W188 H191 H194 V195 C206 W207
BS19 CLA B A191 I194 H195 F211 P216 G220 L221 A190 I193 H194 F210 P215 G219 L220
BS20 CLA B W229 L254 H274 L277 A278 V281 I491 W228 L253 H273 L276 A277 V280 I490
BS21 CLA B F256 L267 H274 H275 I279 H350 W496 F255 L266 H273 H274 I278 H349 W495
BS22 CLA B W122 S185 S186 W189 I272 H275 H276 M351 S356 Y357 W121 S184 S185 W188 I271 H274 H275 M350 S355 Y356
BS23 CLA B L178 F283 A286 M289 Y290 L300 I303 L177 F282 A285 M288 Y289 L299 I302
BS24 CLA B F285 G297 H298 F284 G296 H297
BS25 CLA B H298 I303 H307 H297 I302 H306
BS26 CLA B L304 L314 H318 V406 L303 L313 H317 V405
BS27 CLA B N170 R173 H177 F182 L300 F322 L325 S339 I343 N169 R172 H176 F181 L299 F321 L324 S338 I342
BS28 CLA B S345 L346 Q349 Q375 M382 F386 L526 T529 T530 S344 L345 Q348 Q374 M381 F385 L525 T528 T529
BS29 CLA B V342 L346 H350 F508 V341 L345 H349 F507
BS30 CLA B W59 T116 A369 T372 H373 Y376 M648 I717 A721 I725 W58 T115 A368 T371 H372 Y375 M647 I716 A720 I724
BS31 CLA B W59 T60 G118 W122 V347 M351 Y357 L370 H373 H374 W58 T59 G117 W121 V346 M350 Y356 L369 H372 H373
BS32 CLA B L24 A25 H28 D29 F380 G384 H388 I391 R395 Y554 W572 F575 L23 A24 H27 D28 F379 G383 H387 I390 R394 Y553 W571 F574
BS33 CLA B R313 L314 R409 I410 H413 H420 R312 L313 R408 I409 H412 H419
BS34 CLA B H420 W423 H419 W422
BS35 CLA B G434 H438 K450 G433 H437 K449
BS36 CLA B I462 S465 S466 L477 W492 W496 F508 I461 S464 S465 L476 W491 W495 F507
BS37 CLA B A487 W492 A486 W491
BS38 CLA B Q349 Y352 A459 I462 Q463 F508 H519 I522 V589 Y592 W593 Q348 Y351 A458 I461 Q462 F507 H518 I521 V588 Y591 W592
BS39 CLA B F427 L428 P456 F458 A459 F516 H519 H520 F426 L427 P455 F457 A458 F515 H518 H519
BS40 CLA B I417 A523 H527 I416 A522 H526
BS41 CLA B T17 H681 R691 W692 K693 P696 T16 H680 R690 W691 K692 P695
BS42 CLA B W21 L654 T658 F662 I710 H711 W20 L653 T657 F661 I709 H710
BS43 CLA B A27 H28 A26 H27
BS44 CLA B N175 H176 S179 H288 T292 W294 N174 H175 S178 H287 T291 W293
BS45 CLA B P93 H94 P92 H93
BS46 CLA B W423 F427 F430 H431 W422 F426 F429 H430
BS47 CLA B H307 R308 P309 P310 R313 L314 H306 R307 P308 P309 R312 L313
BS48 PQN B M661 F662 S665 W666 R667 W670 A698 L699 A704 M660 F661 S664 W665 R666 W669 A697 L698 A703
BS49 WVN B F331 F386 F393 F330 F385 F392
BS50 WVN B L64 G137 L141 W208 T212 L63 G136 L140 W207 T211
BS51 WVN B V281 I284 F285 H288 V280 I283 F284 H287
BS52 CLA B F458 W461 F457 W460
BS53 WVN B F427 H431 H520 F426 H430 H519
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0009055 electron transfer activity
GO:0016168 chlorophyll binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
PDBsum8wmv
PubMed38734819
UniProtA6MVZ6|PSAB_RHDSA Photosystem I P700 chlorophyll a apoprotein A2 (Gene Name=psaB)

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