Structure of PDB 8weo Chain B

Receptor sequence

>8weoB (length=186) Species: 817 (Bacteroides fragilis) [Search protein sequence]

AVPSEPKTVYVICLRENGSTIYPNEVSAQMQDAANSVYAVHGLKRYVNFH
FVLYTTEYSCPSGDAKEGLEGFTASLKSNPKAEGYDDQIYFLIRWGTWDN
KILGMSWFNSYNVNTASDFEASGMSTTQLMYPGVMAHELGHILGAEHTDN
SKDLMYATFTGYLSHLSEKNMDIIAKNLGWEAADGD

3D structure

PDB

8weo Bacteroides fragilis toxin in complex with neutralization nanobody

Chain

Resolution

1.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	ZN	B	H348 H352 H358	H137 H141 H147

External links

PDB	RCSB:8weo, PDBe:8weo, PDBj:8weo
PDBsum	8weo
PubMed
UniProt	P54355\|ENTM_BACFG Fragilysin (Gene Name=btfP)

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