Structure of PDB 8vma Chain B

Receptor sequence

>8vmaB (length=215) Species: 9606 (Homo sapiens) [Search protein sequence]

SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIY
SASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFG
QGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK
VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQ
GLSSPVTKSFNRGEC

3D structure

PDB

8vma The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6

Chain

Resolution

2.54 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	B	S92 F95	S92 F95
BS02	rna	B	G58 P60 S61	G58 P60 S61

External links

PDB	RCSB:8vma, PDBe:8vma, PDBj:8vma
PDBsum	8vma
PubMed	39036953

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