Structure of PDB 8vcy Chain B

Receptor sequence

>8vcyB (length=183) Species: 9606 (Homo sapiens) [Search protein sequence]

RDSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAV
TPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVT
ISPSNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQIL
VMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQ

3D structure

PDB

8vcy A structural basis of T cell cross-reactivity to a native and spliced self-antigens presented by HLA-DQ8

Chain

Resolution

2.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	F11 Y30 Y37 Y60 W61 V67 R70 E74 V78 N82 L85	F11 Y30 Y37 Y60 W61 V67 R70 E74 V78 N82 L85

External links

PDB	RCSB:8vcy, PDBe:8vcy, PDBj:8vcy
PDBsum	8vcy
PubMed	39074636
UniProt	O19707

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