Structure of PDB 8vc5 Chain B

Receptor sequence
>8vc5B (length=482) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence]
TTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDSTRESEQ
QIYDALRWLGIEWDEGPDVGGPHGPYRQSERGHIYKKYSDELVEKGHAFT
CFCTPERLDAVRAEQMARKETPRYDGHCMHLPKDEVQRRLAAGESHVTRM
KVPTEGVCVVPDMLRGDVEIPWDRMDMQVLMKADGLPTYFLANVVDDHLM
GITHVLRGEEWLPSAPKLIKLYEYFGWEQPQLCYMPLLRNPDKSKLSKRK
NPTSITFYERMGYLPQALLNYLGRMGWSEKFTLAEMIEHFDLSRVSLGGP
IFDLEKLSWLNGQWIREQSVEEFAREVQKWALNPEYLMKIAPHVQGRVEN
FSQIAPLAGFFFSGGVPLDASLFEHKKLDPTQVRQVLQLVLWKLESLRQW
EKERITGCIQAVAEHLQLKLRDVMPLMFPAITGHASSVSVLDAMEILGAD
LSRYRLRQALELLGGASKKETKEWEKIRDAIP
3D structure
PDB8vc5 Crystal structure of glutamyl-tRNA synthetase GluRS from Pseudomonas aeruginosa (Zinc bound)
ChainB
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 6.1.1.17: glutamate--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C107 C109 Y130 C134 C101 C103 Y124 C128
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004818 glutamate-tRNA ligase activity
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0006418 tRNA aminoacylation for protein translation
GO:0006424 glutamyl-tRNA aminoacylation
GO:0043039 tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8vc5, PDBe:8vc5, PDBj:8vc5
PDBsum8vc5
PubMed
UniProtQ9XCL6|SYE_PSEAE Glutamate--tRNA ligase (Gene Name=gltX)

[Back to BioLiP]