Structure of PDB 8u0l Chain B

Receptor sequence
>8u0lB (length=237) Species: 582419 (Thermococcus paralvinellae) [Search protein sequence]
SHMIIIKLGGSFHRHIVEQIAEEIAQFYPDESFILVHGGGHPNAREYKIT
EGLVGDVDRKRIGFSKTHQAMLKLNDLIIQTFLEKGLPAYSVSSSSIFLL
ENKEVVYGELEILRKLLELKFIPVLFGDTAIALDKGIDILSGDQIVSYLA
KMLKPSKVIFLMDVDGIYDRNPKERDAKLIEELNVEEIRHLLIGNKLREA
LKIAKHSEVYFINGKVKENLGKAIRGEKVGTRLRKLE
3D structure
PDB8u0l Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity.
ChainB
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.26: isopentenyl phosphate kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP B I178 Y179 P183 I217 K220 I167 Y168 P172 I193 K196
BS02 U4R B G46 G138 G153 G38 G127 G142
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0102043 isopentenyl phosphate kinase activity
Biological Process
GO:0008299 isoprenoid biosynthetic process
GO:0016310 phosphorylation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8u0l, PDBe:8u0l, PDBj:8u0l
PDBsum8u0l
PubMed38333996
UniProtW0I5G2

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