Structure of PDB 8tri Chain B

Receptor sequence

>8triB (length=454) Species: 10090 (Mus musculus) [Search protein sequence]

SDVNDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDNDEGLNGAVRYS
FLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPVP
YETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVT
GAVDADEGPNAIVYYFIAAGDEDKNFHLQPDGRLLVLRDLDRETEATFSF
IVKASSNRSWTPPRGPSPALDLLTDLTLQEVRVVLEDINDQPPRFTKAEY
TAGVATDAKVGSELIQVLALDADIGNNSLVFYGILAIHYFRALANDSEDV
GQVFTMGSVDGILRTADLFMAYSPGYFVVDIVARDLAGHNDTAIIGIYIL
RDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGAIVNTDDVQFHVDMKGR
VNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVLDVQ
PAIS

3D structure

PDB

8tri Crystal Structure of Mouse Cadherin-23 EC25-MAD28 F2894A

Chain

Resolution

3.716 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CA	B	D2693 N2695 D2732 D2734 N2738	D115 N117 D154 D156 N160
BS02	CA	B	E2601 E2602 D2657 E2659 D2694	E23 E24 D79 E81 D116
BS03	CA	B	E2601 E2659 D2691 I2692 D2694 N2695	E23 E81 D113 I114 D116 N117
BS04	CA	B	E2716 E2771 D2815 I2816 D2818 D2851	E138 E193 D237 I238 D240 D273
BS05	CA	B	N2817 Q2819 D2849 D2851 N2855 D2913	N239 Q241 D271 D273 N277 D335
BS06	CA	B	N2582 N2584 D2616 D2618 N2622 D2672	N4 N6 D38 D40 N44 D94

External links

PDB	RCSB:8tri, PDBe:8tri, PDBj:8tri
PDBsum	8tri
PubMed
UniProt	Q99PF4\|CAD23_MOUSE Cadherin-23 (Gene Name=Cdh23)

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