Structure of PDB 8tcl Chain B

Receptor sequence
>8tclB (length=316) Species: 672471 (HIV whole-genome vector AA1305#18) [Search protein sequence]
GPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISK
IGPENPYNTPVFAIKWRKLVDFRELNKRTQDFWIPHPAGLKKKKSVTVLD
VGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKISELRQHLL
RWGLTTPDGYELHPDKWGYDPSDLIAEIQKQGQGQWTYQIYQEPSKNLKT
GKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETW
WTEYWQATWIPEWEFV
3D structure
PDB8tcl Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2)
ChainB
Resolution1.95 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TNF B Q23 P55 N57 T131 P140 G141 R143 Q24 P56 N58 T121 P130 G131 R133
BS02 TNF B K22 Q23 P133 N137 T139 P140 G141 K23 Q24 P123 N127 T129 P130 G131
BS03 TNF B K20 K22 K21 K23
External links
PDB RCSB:8tcl, PDBe:8tcl, PDBj:8tcl
PDBsum8tcl
PubMed
UniProtP04585|POL_HV1H2 Gag-Pol polyprotein (Gene Name=gag-pol)

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