Structure of PDB 8std Chain B

Receptor sequence
>8stdB (length=202) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
RRNGFPEVIYGAGKTATQIVGIVQALSQQLPILTTRLSAEKFAALQPALP
TAVYHATAQCMTVGEQPAPKTPGYIAVVTAGTADQPVAEEAAVTAETFGN
RVERVYDVGVAGIHRLFAKLDVIRGARVVIVIAGMEGALASVVGGLVDKP
VIAVPTSVGYGTSFQGMTALLTMLNSCASGITVVNIDNGFGAAYSASMVN
QM
3D structure
PDB8std Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
ChainB
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.143: pyridinium-3,5-biscarboxylic acid mononucleotide synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B G188 G224 G144 G180
BS02 DND B A124 G125 T126 A127 D128 G153 V154 A177 G178 E180 L183 V202 A80 G81 T82 A83 D84 G109 V110 A133 G134 E136 L139 V158
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016787 hydrolase activity
Biological Process
GO:0006189 'de novo' IMP biosynthetic process
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8std, PDBe:8std, PDBj:8std
PDBsum8std
PubMed37831946
UniProtF9UST0|LARB_LACPL Pyridinium-3,5-biscarboxylic acid mononucleotide synthase (Gene Name=larB)

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