Structure of PDB 8rkt Chain B

Receptor sequence
>8rktB (length=87) Species: 34078 (Scytonema hofmannii) [Search protein sequence]
ALTQERKQEIIVNYQVHETDTGSADVQVAMLTERINRLSLHLQANKKDHS
SRRGLLKLIGQRKRLLAYIQKDSREKYQALIGRLGIR
3D structure
PDB8rkt Conformational landscape of the type V-K CRISPR-associated transposon integration assembly.
ChainB
Resolution2.35 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B Q6 H19 D22 T23 G24 S25 Q29 R36 L40 H43 N47 K49 D50 S52 S53 R55 G56 K59 K65 R66 L67 Y70 K73 D74 Q4 H17 D20 T21 G22 S23 Q27 R34 L38 H41 N45 K47 D48 S50 S51 R53 G54 K57 K63 R64 L65 Y68 K71 D72
Gene Ontology
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8rkt, PDBe:8rkt, PDBj:8rkt
PDBsum8rkt
PubMed38834066
UniProtA0A139X9A4

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