Structure of PDB 8rh3 Chain B

Receptor sequence
>8rh3B (length=153) Species: 251229 (Chroococcidiopsis thermalis PCC 7203) [Search protein sequence]
KRKIIYLASPYGFSQQQKTLLLPPIVRALEALGIEVWEPFARNNQIDFSQ
ADWAYRVAQADLQDVKNCDGIFAVVNGTPPDEGVMVELGMAIALNKAIFL
FRDDFRRCSDNERYPLNLMLFAGLPEIGWENYYYTSVDEIQSHDKALYKW
LTG
3D structure
PDB8rh3 Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase
ChainB
Resolution1.96 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 A1H0F B N118 M120 N117 M119
BS02 A1H0F B Y7 P40 D62 E88 Y6 P39 D61 E87
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0046872 metal ion binding
GO:0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity
Biological Process
GO:0009159 deoxyribonucleoside monophosphate catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8rh3, PDBe:8rh3, PDBj:8rh3
PDBsum8rh3
PubMed38449528
UniProtK9TVX3

[Back to BioLiP]