Structure of PDB 8rdw Chain B

Receptor sequence

>8rdwB (length=368) Species: 45610 (Psychrobacter urativorans) [Search protein sequence]

KATLKSLRETKANPAVSIFVKTHREHPANDQDPIALKNQLKIVEERLTNE
FDKRTATTILDKIHAETKEYNHKYNLDTLAIFASVDDVQLIRMPLDTPER
VVISNRFATRDLVRDMASAVHYYTVVLTRDKARLIEAANDRVVAEFDTDN
AKQNNMEGIPFPIDNNGLYTTGDGGSDRSANNENSYLKEFFNQVDKSVQE
LWGEHKMPLVIVGDVRNISYYKEVCDRPENIIATVSNLTELEDGNAQRII
DGVQDAVEGYRTSLHEAALGEIDKARGANALSTDLQDVYRAAFQGAGETL
YVRRGYIQAAKVDEDAQTLTMADAAADGVTDDAVGLIIEHVINNGGKAVF
MPQEMMSADQPIALVTRY

3D structure

PDB

8rdw A new family of bacterial ribosome hibernation factors

Chain

Resolution

2.74 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	B	R25 E26 K74 Y75 T129 R130 D131 L169 Y170 S177 D178 R179 S180 A181 N182 E190 N193 K197 G204 E205 K207 D215 R217 S220 Y221 E224 D227 N238 E243 D274 R277 G278 G296 E299 N345 R368 Y369	R24 E25 K73 Y74 T128 R129 D130 L168 Y169 S176 D177 R178 S179 A180 N181 E189 N192 K196 G203 E204 K206 D214 R216 S219 Y220 E223 D226 N237 E242 D273 R276 G277 G295 E298 N344 R367 Y368
BS02	rna	B	H27 I35 K38 N39	H26 I34 K37 N38

External links

PDB	RCSB:8rdw, PDBe:8rdw, PDBj:8rdw
PDBsum	8rdw
PubMed	38355796
UniProt	A0A0M3V8U3

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