Structure of PDB 8rdp Chain B

Receptor sequence
>8rdpB (length=106) Species: 55518 (Magnetospirillum gryphiswaldense) [Search protein sequence]
GASIFRCRQCGQTISRRDWLLPMGGDHEHVVFNPAGMIFRVWCFSLAQGL
RLIGAPSGEFSWFKGYDWTIALCGQCGSHLGWHYEGGSQPQTFFGLIKDR
LAEGPA
3D structure
PDB8rdp Discovery and characterization of potent spiro-isoxazole-based cereblon ligands with a novel binding mode.
ChainB
Resolution1.76 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C24 C27 C90 C93 C7 C10 C73 C76
BS02 A1HZ7 B N50 P51 F77 S78 W79 W85 W99 Y101 N33 P34 F60 S61 W62 W68 W82 Y84
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8rdp, PDBe:8rdp, PDBj:8rdp
PDBsum8rdp
PubMed38552426
UniProtA4TVL0

[Back to BioLiP]