Structure of PDB 8qrn Chain B

Receptor sequence
>8qrnB (length=225) Species: 9606 (Homo sapiens) [Search protein sequence]
EDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFM
EPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFS
YLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHTLNNI
FEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHLYCRL
FQTAITRAKEKRQQVEALYRLQGQK
3D structure
PDB8qrn GTPBP8 plays a role in mitoribosome formation in human mitochondria.
ChainB
Resolution2.98 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B R100 R147 R149 Y170 G173 T177 N178 N201 I202 R210 K214 R48 R95 R97 Y118 G121 T125 N126 N149 I150 R158 K162
BS02 MG B H93 D224 D240 D241 H41 D172 D188 D189
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0032543 mitochondrial translation
GO:0061668 mitochondrial ribosome assembly
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005759 mitochondrial matrix
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8qrn, PDBe:8qrn, PDBj:8qrn
PDBsum8qrn
PubMed38969660
UniProtQ9Y399|RT02_HUMAN Small ribosomal subunit protein uS2m (Gene Name=MRPS2)

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