Structure of PDB 8qcc Chain B

Receptor sequence
>8qccB (length=280) Species: 562 (Escherichia coli) [Search protein sequence]
RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDI
RLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPVG
GGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAA
FAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIET
LLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTE
SEARQVLEQAPEWLNGFVAKGVNLSPLHRA
3D structure
PDB8qcc E.coli IspE in complex with a ligand (1)
ChainB
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADP B V60 N65 L66 K96 V100 G101 G103 G105 G106 G107 N110 V59 N64 L65 K95 V99 G100 G102 G104 G105 G106 N109
BS02 UKO B K10 N12 Y25 H26 L28 F32 A140 D141 V156 T181 F185 K9 N11 Y24 H25 L27 F31 A139 D140 V155 T180 F184
BS03 MG B Y37 G38 Y36 G37
BS04 MG B R147 E158 R146 E157
External links
PDB RCSB:8qcc, PDBe:8qcc, PDBj:8qcc
PDBsum8qcc
PubMed
UniProtB7LXC3|ISPE_ECO8A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (Gene Name=ispE)

[Back to BioLiP]