Structure of PDB 8pqq Chain B

Receptor sequence
>8pqqB (length=154) Species: 251229 (Chroococcidiopsis thermalis PCC 7203) [Search protein sequence]
MKRKIIYLASPYGFSQQQKTLLLPPIVRALEALGIEVWEPFARNNQIDFS
QADWAYRVAQADLQDVKNCDGIFAVVNGTPPDEGVMVQLGMAIALNKAIF
LFRDDFRRCSDNERYPLNLMLFAGLPEIGWENYYYTSVDEIQSHDKALYK
WLTG
3D structure
PDB8pqq Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase
ChainB
Resolution2.23 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CFB B A9 S10 F14 P40 F41 N44 D62 D82 Q88 A9 S10 F14 P40 F41 N44 D62 D82 Q88
BS02 CFB B D111 N118 L119 M120 D111 N118 L119 M120
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0046872 metal ion binding
GO:0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity
Biological Process
GO:0009159 deoxyribonucleoside monophosphate catabolic process

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Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8pqq, PDBe:8pqq, PDBj:8pqq
PDBsum8pqq
PubMed38449528
UniProtK9TVX3

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