Structure of PDB 8pjf Chain B

Receptor sequence
>8pjfB (length=191) Species: 9606 (Homo sapiens) [Search protein sequence]
MGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRA
VTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKV
TVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQ
NGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
3D structure
PDB8pjf A targeted single mutation in influenza A virus universal epitope transforms immunogenicity and protective immunity via CD4 + T cell activation.
ChainB
Resolution1.48 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B F13 E28 Y47 P56 D57 W61 L67 R71 Y78 H81 N82 V85 F14 E29 Y48 P57 D58 W62 L68 R72 Y79 H82 N83 V86
External links
PDB RCSB:8pjf, PDBe:8pjf, PDBj:8pjf
PDBsum8pjf
PubMed38819988
UniProtP01911|DRB1_HUMAN HLA class II histocompatibility antigen, DRB1 beta chain (Gene Name=HLA-DRB1)

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