Structure of PDB 8pe1 Chain B

Receptor sequence
>8pe1B (length=451) Species: 330879 (Aspergillus fumigatus Af293) [Search protein sequence]
ATLPVIEAKGNKFFYSNNGTEFFIRGVAYQQEYQASDYTDPLANVDNCKR
DIPYLKQLRTNVIRTYAVDPTKDHDECMKLLDDAGIYLITDLSAPSESIN
RADPAWNTDLYKRYTSVIDAFAKYSNVIGFFAGNEVANDNNNTNSIAYVK
AAVRDMKSYIKSKDYRSSLLVGYATDDDAHIRADLADYLVCGDKESSIDM
FGYNIYEWCGDSSFEKSGYKDRTEEFSKYPVPAFFSEYGCIDPKPRKFTD
VAALYGPQMNDVWSGGIVYMYFQEANDYGLVSVSGDNVKTKEDFSYLSVQ
MQKVTATGVNSASYTASNTAVPTCPSVGAKWEASNKLPPSPNSELCDCMV
ETLSCTVKDSVDEKEYGDLFDYLCAAGVCGGINSNSTSGDYGAYSVCSAK
QKLSFVMNQYYKKNNKAATACDFDGKAQTKKGADASGSCASLISQAGTAG
T
3D structure
PDB8pe1 Broad Protection against Invasive Fungal Disease from a Nanobody Targeting the Active Site of Fungal beta-1,3-Glucanosyltransferases.
ChainB
Resolution1.9 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MAN B Q81 S322 Q57 S298
BS02 MAN B S319 Y320 V323 S295 Y296 V299
BS03 MAN B E24 K26 S33 S335 E7 K9 S16 S311
BS04 MAN B T347 C348 P349 T323 C324 P325
BS05 MAN B V333 N334 S337 V309 N310 S313
External links
PDB RCSB:8pe1, PDBe:8pe1, PDBj:8pe1
PDBsum8pe1
PubMed38856634
UniProtP0C956|GEL4_ASPFU 1,3-beta-glucanosyltransferase gel4 (Gene Name=gel4)

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