Structure of PDB 8pdk Chain B

Receptor sequence
>8pdkB (length=137) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
DLKLGELLLQKGWISREALEEALVEQEKTGDLLGRILVRKGLPEEALYRA
LAEQKGLEFLESTEGIVPDPSAALLLLRSDALRYGAVPIGFQNGEVEVVL
SDPRHKEAVAQLLNRPARFYLALPQAWEELFRRAYPQ
3D structure
PDB8pdk X-ray structure of the PilF-GSPIIB domain in the c-di-GMP bound state
ChainB
Resolution2.0 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C2E B K167 L168 G169 L187 Q190 L196 L197 G198 R199 L215 Q218 D266 R268 K3 L4 G5 L23 Q26 L32 L33 G34 R35 L51 Q54 D102 R104
External links
PDB RCSB:8pdk, PDBe:8pdk, PDBj:8pdk
PDBsum8pdk
PubMed
UniProtQ5SLC9|PILB_THET8 Type IV pilus assembly ATPase PilB (Gene Name=pilB)

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