Structure of PDB 8p7i Chain B

Receptor sequence
>8p7iB (length=340) Species: 293 (Brevundimonas diminuta) [Search protein sequence]
ISEFITNSGDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGS
RAALVEKAVRGLRRARAAGVRTIVDVSTFDAGRDVSLLAEVSRAADVHIV
AATGLWEDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATQGK
ATPFQELVLRAAARASLATGVPVTTHTFASQRDGEQQAAIFESEGLSPSR
VCIGHSDDTDDLSYLTALAARGYLIGLDGIPHSAIGLEDNASASALLGNR
SWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDSVNPDGM
AFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRAS
3D structure
PDB8p7i The impact of molecular variants, crystallization conditions and the space group on ligand–protein complexes: a case study on bacterial phosphotriesterase
ChainB
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.8.1: aryldialkylphosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN B H55 H57 D301 H30 H32 D276
BS02 ZN B H201 H230 H176 H205
BS03 X3E B H57 H201 H230 D301 H32 H176 H205 D276
Gene Ontology
Molecular Function
GO:0004063 aryldialkylphosphatase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0016788 hydrolase activity, acting on ester bonds
GO:0046872 metal ion binding
Biological Process
GO:0009056 catabolic process
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8p7i, PDBe:8p7i, PDBj:8p7i
PDBsum8p7i
PubMed37860961
UniProtP0A434|OPD_BREDI Parathion hydrolase (Gene Name=opd)

[Back to BioLiP]