Structure of PDB 8oi9 Chain B

Receptor sequence
>8oi9B (length=346) Species: 5722 (Trichomonas vaginalis) [Search protein sequence]
MSIKCALDCDPGHDDLAMIMLAVYSPKLDVQYISTTHGNQTVNKTYQNAR
RTLNLIKRADKIPVYRGYSKPLTRESVACPEIHGESGLGGVDWSEIDRTM
PRNPALDILGYKDESELRPDDFFKHLHRLVSAAEDKFDIISTGSETNIAQ
YLLAYPEDAKKIRMTTMAGNFMIVGNIMPFAEFNVLIDPEAISNILQSGV
DYTFAAPLDITHTVLVTEKVINDIKAATEPYSPKFTEMIIKLLFFFKDTY
RDVFGFIDPPLHDPVAAFHLIAPEWFEHVRCHVDIETKGEYTYGCCCTNL
ILKKKDPTKIVKPDNATVCLKLKEGGHDAFWNQMITVWGEIAKEIG
3D structure
PDB8oi9 A riboside hydrolase that salvages both nucleobases and nicotinamide in the auxotrophic parasite Trichomonas vaginalis.
ChainB
Resolution1.95 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B D10 D15 T142 D263 D10 D15 T142 D263
BS02 38T B D14 E182 F183 F246 D263 D14 E182 F183 F246 D263
BS03 MG B A22 V23 S25 L28 A22 V23 S25 L28
Gene Ontology
Molecular Function
GO:0008477 purine nucleosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0046872 metal ion binding
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0006152 purine nucleoside catabolic process
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8oi9, PDBe:8oi9, PDBj:8oi9
PDBsum8oi9
PubMed37482279
UniProtA2FTT0

[Back to BioLiP]