Structure of PDB 8oi3 Chain B

Receptor sequence
>8oi3B (length=183) Species: 374 (Bradyrhizobium) [Search protein sequence]
PVLGPTQWLGDEHIQRDYELLAQELQQNNPDLAARTRFVDPLIAQMLRSP
SKEVAERALGWVRPGTADFLFLPVSDASDTDRHQRGSHWSLLLVDRRDRG
RRVAYHYDSTQGYNDGLAAELAGRLDANLQQAPIRQQQNSYDCGVFVLDG
TRELVRRLAARRPDLNLNNLVISRQELRDRLGA
3D structure
PDB8oi3 Structure of NopD with AtSUMO2
ChainB
Resolution1.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AYE B W836 S915 Q965 S968 Y969 C971 W8 S87 Q137 S140 Y141 C143
Gene Ontology
Molecular Function
GO:0008234 cysteine-type peptidase activity
GO:0019784 deNEDDylase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8oi3, PDBe:8oi3, PDBj:8oi3
PDBsum8oi3
PubMed
UniProtA0A2U9K2V6

[Back to BioLiP]