Structure of PDB 8k88 Chain B

Receptor sequence
>8k88B (length=258) Species: 35554 (Geobacter sulfurreducens) [Search protein sequence]
GKSFPALRTNALPVVTQSIRCGVVTLASPITFSELKERISQKSPKALLTY
TEKVLFLGGEPEIRKIFSNDEINSIGQYYIDEIAQSVAASTFLKSFVEEA
ILTALLREKPILHRVRHRTHYAVIPNASAKDDRFLDLRKAVGFKGDLGYI
TGNVTNAKELSWAEAVSIRLEERGGKLWIMLKPEIWIKPLDRREEATDFI
RSRRRYRFNQCSYQILDAWIKILFGSIGGGGTVNISCFPDAEFKAEFEIG
TRTAFSLG
3D structure
PDB8k88 Structural Basis of prokaryotic Argonaute System
ChainB
Resolution2.6 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B K360 T415 F416 K418 R442 F532 K36 T91 F92 K94 R118 F208
BS02 rna B T355 Y374 R440 T31 Y50 R116
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8k88, PDBe:8k88, PDBj:8k88
PDBsum8k88
PubMed38923459
UniProtQ74DF6

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