Structure of PDB 8k7v Chain B

Receptor sequence
>8k7vB (length=755) Species: 1796616 (Blautia pseudococcoides) [Search protein sequence]
AVIFHEKTKEFHIFNREVSYLMRIMENGQLENLYYGKVIRDKEDFGYLHE
EAMRSQMSVCIPEPGILSMQYTRQEYPVYGTGDYRSPALTVLQENGSRLV
DFSYVSHEIYKGKKGIPPLPSTYAESEDEAETLEVTLHDQVTDTDLVLTY
TIYEDYPVITRNARFEQKGEQKIVLERAMSASVEFLDMDYELVQLSGAWS
RERYVKNRKLEMGIQSVHSLNGTCGGAEHNPFIALKRPQTTENQGEVYGF
SLVYSGNFLAQAEVSTFDMTRVMLGINPEDFSWELNQGESFQTPEVVMVY
SDRGLNKMSQAYHRLYRTRLMRVTWRDKARPILLNNWEATYFDFNEEKIL
KIAEKAKEAGVELFVLDDGWFGARNDDYRGLGDWYVNLEKLPDGIAGLSR
KVEALGLKFGLWVELEMVNKDSDLYRAHPDWLIGAPDRFESHARHQHVLD
FSRKEVVDYIYKMIAKVLRESSISYIKWDMNRYMTEPYSRGADASQQGKV
MHKYILGVYDLYTRLTTEFPEILFESCASGGARFDPAMLYFAPQTWTSDD
TDASERTKIQYGTSYVYPVVSMGSHVSAVPNHQMHRMTPIETRANVAYFG
TFGYELDLNLLSEAELESVKKQIAFMKEYRELIQVDGDFYRLLSPFEGNE
TAWMVVAQDKSRAVAAFYQRMNKVNASWIRFKLQGLDAGTLYEVSCDMAP
SASYDESLAKIYGIQVKTYRAYGDELMQVGIPIDREDLNKKGGDFASLLY
TLKKV
3D structure
PDB8k7v Activity-Based Meta proteomics Drives Discovery and Enzymological Characterization of Novel alpha-galactosidases in the Gut Microbiome
ChainB
Resolution3.17 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 VQX B D368 W413 D480 N482 D550 D367 W412 D479 N481 D549
Gene Ontology
Molecular Function
GO:0004557 alpha-galactosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds

View graph for
Molecular Function
External links
PDB RCSB:8k7v, PDBe:8k7v, PDBj:8k7v
PDBsum8k7v
PubMed
UniProtA0A1C7IHX3

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