Structure of PDB 8k34 Chain B

Receptor sequence
>8k34B (length=434) Species: 1393122 (Thermoflavifilum thermophilum) [Search protein sequence]
ELIYIEEPSILFAHGQKCTDPRDGLALFGPLNQIYGIKSGVVGTQKGLQI
FKSYLDKIQKPIYNHNNITRPMFPGFEAVFGCKWESQNIVFKEITTYDLV
TLFNDKIITANKNDEERVDVWFVIVPEEIYKYCFHDQLKARLLEHTIPTQ
ILRESTLAWRDFKNTFGAPIRDFSKIEGHLAWTISTAAYYKAGGKPWKLG
DIRPGVCYLGLVYKKIEKSKNPQNACCAAQMFLDNGDGTVFKGEVGPWYN
PEKGEYHLKPKEAKALLTQALESYKEQNKSYPKEVFIHARTRFNDEEWNA
FNEVTPKNTNLVGVTITKSKPLKLYKTEGAFPIMRGNAYIVDEKKAFLWT
LGFVPKLQSTLSMEVPNPIFIEINKGEAEIQQVLKDILALTKLNYNACIY
ADGEPVTLRFANKIGEILTASTEIKTPLAFKYYI
3D structure
PDB8k34 Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
ChainB
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B Y148 C151 F206 H207 Q222 I223 L224 R225 T228 F245 H251 L252 T255 I256 N466 N468 A469 D474 F482 Y130 C133 F134 H135 Q150 I151 L152 R153 T156 F173 H179 L180 T183 I184 N394 N396 A397 D402 F410
BS02 MG B N468 I507 N396 I434
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:8k34, PDBe:8k34, PDBj:8k34
PDBsum8k34
PubMed37932528
UniProtA0A1I7NFD7

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