Structure of PDB 8k2e Chain B

Receptor sequence

>8k2eB (length=164) Species: 9606 (Homo sapiens) [Search protein sequence]

GSTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFR
SARSVILIFSVRESGKFQGFARLSSESHHGSPIHWVLPAGMSAKMLGGVF
KIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFP
PDESIDLYQVIHKM

3D structure

PDB

8k2e PocketFlow is a data-and-knowledge-driven structure-based molecular generative model

Chain

Resolution

1.6 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	VIM	B	S362 N363 N367 W377 S378 W428 L430 P431 M434 L439	S20 N21 N25 W35 S36 W85 L87 P88 M91 L96

External links

PDB	RCSB:8k2e, PDBe:8k2e, PDBj:8k2e
PDBsum	8k2e
PubMed
UniProt	Q96MU7\|YTDC1_HUMAN YTH domain-containing protein 1 (Gene Name=YTHDC1)

[Back to BioLiP]